General Information of This Controlled Protein (CP)
CP ID CP00295
CP Name Intracellular Tropomyosin receptor kinase B (iTrkB)
CP Type Fusion protein
Common Name BDNF/NT-3 growth factors receptor (EC 2.7.10.1) (GP145-TrkB) (Trk-B) (Neurotrophic tyrosine kinase receptor type 2) (TrkB tyrosine kinase) (Tropomyosin-related kinase B)
Organism Homo sapiens (Human)
UniProt ID Q16620
UniProt Entry NTRK2_HUMAN
KEGG hsa:4915
Function Receptor tyrosine kinase involved in the development and the maturation of the central and the peripheral nervous systems through regulation of neuron survival, proliferation, migration, differentiation, and synapse formation and plasticity (By similarity). Receptor for BDNF/brain-derived neurotrophic factor and NTF4/neurotrophin-4. Alternatively can also bind NTF3/neurotrophin-3 which is less efficient in activating the receptor but regulates neuron survival through NTRK2. Upon ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades. Through SHC1, FRS2, SH2B1, SH2B2 activates the GRB2-Ras-MAPK cascade that regulates for instance neuronal differentiation including neurite outgrowth. Through the same effectors controls the Ras-PI3 kinase-AKT1 signaling cascade that mainly regulates growth and survival. Through PLCG1 and the downstream protein kinase C-regulated pathways controls synaptic plasticity. Thereby, plays a role in learning and memory by regulating both short term synaptic function and long-term potentiation. PLCG1 also leads to NF-Kappa-B activation and the transcription of genes involved in cell survival. Hence, it is able to suppress anoikis, the apoptosis resulting from loss of cell-matrix interactions. May also play a role in neutrophin-dependent calcium signaling in glial cells and mediate communication between neurons and glia.
Sequence
LARHSKFGMKGPASVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPVIENPQ
YFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK
DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPD
AVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF
GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY
QLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP
VYLDILG
Optogenetic System (OS) Controlling This CP
OS00563
OS Info
OS Name
Optogenetic controlled iTrkB signaling system 4
[1]
Photoreceptor (PR) Name
Aureochromes 1 from Vaucheria frigida (AuLOV)
PR Info
Components
Photoreceptor
Aureochromes 1 from Vaucheria frigida (AuLOV)
Cofactor
Flavin mononucleotide (FMN)
OS00564
OS Info
OS Name
Optogenetic controlled iTrkB signaling system 5
[1]
Photoreceptor (PR) Name
Aureochromes 1 from Vaucheria frigida (AuLOV)
PR Info
Components
Photoreceptor
Aureochromes 1 from Vaucheria frigida (AuLOV)
Cofactor
Flavin mononucleotide (FMN)
OS00019
OS Info
OS Name
Optogenetic controlled iTrkB signaling system1
[1]
Photoreceptor (PR) Name
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
PR Info
Components
Photoreceptor
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
Complementary Protein
Cryptochrome-interacting basic-helix-loop-helix 1 (CIB1/CIBN)
Cofactor
Flavin adenine dinucleotide (FAD)
OS00020
OS Info
OS Name
Optogenetic controlled iTrkB signaling system2
[1]
Photoreceptor (PR) Name
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
PR Info
Components
Photoreceptor
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
Complementary Protein
Cryptochrome-interacting basic-helix-loop-helix 1 (CIB1/CIBN)
Cofactor
Flavin adenine dinucleotide (FAD)
OS00021
OS Info
OS Name
Optogenetic controlled iTrkB signaling system3
[1]
Photoreceptor (PR) Name
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
PR Info
Components
Photoreceptor
Photolyase homology region of Arabidopsis Cryptochromes 2 (CRY2PHR)
Complementary Protein
Cryptochrome-interacting basic-helix-loop-helix 1 (CIB1/CIBN)
Cofactor
Flavin adenine dinucleotide (FAD)
OS00185
OS Info
OS Name
Optogenetic regulate iTrkB activity by iLID system
[2]
Photoreceptor (PR) Name
Improved Light-Inducible Dimer (iLID)
PR Info
Components
Photoreceptor
Improved Light-Inducible Dimer (iLID)
Complementary Protein
Stringent starvation protein B (SspB)
Cofactor
Flavin mononucleotide (FMN)
References
1 Optical Activation of TrkB Signaling
2 Construction of Light-Activated Neurotrophin Receptors Using the Improved Light-Induced Dimerizer (iLID)