General Information of This Controlled Protein (CP)
CP ID CP00460
CP Name T-cell receptor (TCRs)
CP Type Recruited protein
Common Name M1-specific T cell receptor beta chain (TR beta chain TRBV19*01J2S7*01C*02)
Organism Homo sapiens (Human)
UniProt ID P0DSE2
UniProt Entry TRBR1_HUMAN
Function The beta chain of TRAV27*01J42*01C*01/TRBV19*01J2S7*01C*02 alpha-beta T cell receptor (TR) clonotype that is specific for HLA-A*02:01-restricted M/matrix protein 1 immunodominant epitope GILGFVFTL of influenza A virus (IAV). Classified as a public TCR clonotype, it is preferentially selected in effector memory CD8-positive T cells among multiple HLA-A*02:01 carriers/individuals and confers long-lived immunity against IAV infection. Can cross-recognize sporadically emerging IAV variants by molecular mimicry, inducing immunity toward different influenza strains. Antigen recognition initiates TR-CD3 clustering on the cell surface and intracellular activation of LCK that phosphorylates the ITAM motifs of CD3G, CD3D, CD3E and CD247 enabling the recruitment of ZAP70. In turn, ZAP70 phosphorylates LAT, which recruits numerous signaling molecules to form the LAT signalosome. The LAT signalosome propagates signal branching to three major signaling pathways, the calcium, the mitogen-activated protein kinase (MAPK) kinase and the nuclear factor NF-kappa-B (NF-kB) pathways, leading to the mobilization of transcription factors that are critical for gene expression and essential for T cell differentiation into effector/memory T cells (By similarity).
Sequence
MSNQVLCCVVLCLLGANTVDGGITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQ
GLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSIRSSYEQ
YFGPGTRLTVTEDLKNVFPPKVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG
KEVHSGVSTDPQPLKEQPALNDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEW
TQDRAKPVTQIVSAEAWGRADCGFTSESYQQGVLSATILYEILLGKATLYAVLVSALVLM
AMVKRKDSRG
Optogenetic System (OS) Controlling This CP
OS00543
OS Info
OS Name
Optogenetic regulate ligand -T-cell receptor interaction system
[1], [2], [3]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
OS00690
OS Info
OS Name
Optogenetic T Cell Receptor controling system 1
[4]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
OS00691
OS Info
OS Name
Optogenetic T Cell Receptor controling system 2
[4]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
OS00692
OS Info
OS Name
Optogenetic T Cell Receptor controling system 3
[4]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
OS00693
OS Info
OS Name
Optogenetic T Cell Receptor controling system 4
[4]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
OS00694
OS Info
OS Name
Optogenetic T Cell Receptor controling system 5
[4]
Photoreceptor (PR) Name
Phytochrome B tetramer (PhyBt)
PR Info
Components
Photoreceptor
Phytochrome B tetramer (PhyBt)
Complementary Protein
Phytochrome interacting factor 6 (C9S/C10S/S37A) (PIFS=PIF6(C9S/C10S/S37A))
Cofactor
Phycocyanobilin (PCB)
References
1 Optogenetic control shows that kinetic proofreading regulates the activity of the T cell receptor
2 Optogenetic Tuning of Ligand Binding to The Human T cell Receptor Using The opto-ligand-TCR System
3 Cross-TCR Antagonism Revealed by Optogenetically Tuning the Half-Life of the TCR Ligand Binding
4 Engineering of an Optogenetic T Cell Receptor Compatible with Fluorescence-Based Readouts