General Information of This Optogenetic System (OS)
OS ID
OS00525
OS Name
Optogenetic control secreted alkaline phosphatase expression system (Opto-SEAP)
[1]
Photoreceptor (PR)
PR Info
PR Name
Phytochrome B (PhyB)
Source of Species
Arabidopsis
Class
Phytochromes
UniProt ID
P14713
GenBank
NP_179469
PDB ID
4OUR
Components
Photoreceptor: Phytochrome B (PhyB)
Complementary Protein: Phytochrome interacting factor 6 (PIF6)
Cofactor: Phycocyanobilin (PCB)
Complementary Protein Phytochrome interacting factor 6 (PIF6)
Cofactor Phycocyanobilin (PCB)
Controlled Protein Recruited protein Secreted alkaline phosphatase
Detail Info
Fusion protein Virus protein 16
Detail Info
OS Application Information (1)
Mechanism of Action PhyB-PIF6 heterodimerization [ 1]
Controlled Signal Pathway Gene expression activation
Effect Activation
Application Red-far red light regulated gene expression provides an in cell readout of related PPI affinities
Note E means E-protein DNA-binding domain
Light Information Activation Wavelength 660 nm
Process Reversible
Deactivation Wavelength 740 nm
Activation Time hours
Deactivation Time Hours
Light Intensity 20 micromoles per square meter per second
Expression Information Expression Method Transfection
Cell Lines CHO K1 cells
References
1 Deconstructing and repurposing the light-regulated interplay between Arabidopsis phytochromes and interacting factors