Details of the Optogenetic Tool

General Information of This Photoreceptor (PR)
PR ID PR00305
PR Name Residue1-621 of Phytochrome B (PhyB (1-621))
Source of Species Arabidopsis
Class Phytochromes
UniProt ID P14713
GenBank NP_179469
PDB ID 4OUR
Sequence
MVSGVGGSGGGRGGGRGGEEEPSSSHTPNNRRGGEQAQSSGTKSLRPRSNTESMSKAIQQ
YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM
IAVDESSFRIIGYSENAREMLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFV
AREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVR
AISQLQALPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIG
LHYPATDIPQASRFLFKQNRVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQ
YMANMGSIASLAMAVIINGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEF
LMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA
FLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMA
VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWE
TAEMDAIHSLQLILRDSFKES
Components Photoreceptor Residue1-621 of Phytochrome B (PhyB (1-621))
Complementary Protein Phytochrome interacting factor 6 (PIF6)
Detail Info
Cofactor Phycocyanobilin (PCB)
Detail Info
3D Structure
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Complementary Protein Detail of This PR
Complementary Protein Phytochrome interacting factor 6 (PIF6)
UniProt ID Q8L5W7
Sequence
MMFLPTDYCCRLSDQEYMELVFENGQILAKGQRSNVSLHNQRTKSIMDLYEAEYNEDFMK
SIIHGGGGAITNLGDTQVVPQSHVAAAHETNMLESNKHVDDSETLKASSSKRMMVDYHNR
KKIKFIPPDEQSVVADRSFKLGFDTSSVGFTEDSEGSMYLSSSLDDESDDARPQVPARTR
KALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQ
VQMMTMGNRFVTPSMMMPLGPNYSQMGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADM
LRFLNHPGLMPMQNSAPFIPTENCSPQSVPPSCAAFPNQIPNPNSLSNLDGATLHKKSRK
TNR
Cofactor Detail of This PR
Cofactor Name Phycocyanobilin (PCB)
PubChem CID 5280816
Structure
Formula C33H38N4O6
Molecular Weight 586.7
Optogenetic System (OS) Consisting of This PR
OS00536
OS Info
OS Name: Optogenetic modify subcellular protein localization system (Opto-MSPL)
[1] , [2]
Recruited protein: Partitioning defective 3
Detail Info
Functional protein: Phytochrome B
Detail Info
References
1 Optogenetic Control of Subcellular Protein Location and Signaling in Vertebrate Embryos
2 Reversible Optogenetic Control of Subcellular Protein Localization in a Live Vertebrate Embryo